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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905802.1_cds_XP_016456072.1_49943
CDS Infomation

[gene=LOC107780065] [db_xref=GeneID:107780065] [protein=NF-X1-type zinc finger protein NFXL2-like] [partial=3'] [protein_id=XP_016456072.1] [location=join(190208..191359,191457..191570,191652..191707,192664..192730,193671..193763,193940..194025,194110..194272,194421..194591,194787..194977,195288..195369,197302..>197406)] [gbkey=CDS]
Sequence

ATGACCTCCTGGTCCGCCACCGTTGCACCACCTCTCTCACCGCCATCTTCCGACTCCGAT
TCCGATTCCGATTCCGCCACCACCTCCGACTCCCATCACCACCGCCATTCCGACCTCTCT
TCCACCATCTTCAAATCCTATCTCGAACATTCCAGCGGCGACCACAACAACCAACAACAG
CAACAACATGACCTCATCAAAATCCAATCTTTCCTCACTTCTTCTCGTTCCGGTGCCCTC
TCATGCCTCATTTGCCTCGAAAGAATCCGTCCTTCCGATCCCACATGGTCATGTTCCTCT
GGCTGTTTCGCCGTCTTTTATCTCCATTGTATCCAATCATGGGCCGTTCAATGCTCCAAT
TTAGCCGCCGCACGTGCCGTCACGCGCGCCGCCACTCCGAATGACAGTTCTCTTTTATGG
CACTGCCCCAAATGCCGAGTTGAGTATTCCAAATCGCAGATCCCTAAAAATTACTATTGT
TTCTGTGGGAAACTCCCGGACCCACCTCATGATCCTTGGGTTTTACCTCATTCTTGTAAT
GAAATTTGTGGGAGGCCATTGAAGTACAATTGTGGACACCATTGCTTGTTGTTGTGCCAC
CCGGGGCCCTGCCCGTCTTGTCCAAAATTGGTTAAATCCAGGTGCTTTTGTGGGGCTGTG
GAAGATGTCAAACGATGTGGGTTCAAGAATTTCTCGTGCAACGGTGTTTGTAAAAAGTTG
TTGGATTGTAAGACTCATATGTGTACTGAAACTTGCCATGAGGGTGATTGTCCTCCTTGT
AAAGCAAAAGGCATTTATAAGTGCCAATGTGGGAAGTTGGAGATGAAAAGAGAGTGTTTT
GATAGGGTCTTTAGGTGTGAGAATCCATGTGATAAGTTACTTGGTTGTGGGAGGCATAAG
TGTGAGAGAGGTTGTCATGAGGGTGAATGTGGAGATTGTCCACTTCAAGGGAAGAGGACT
TGTCCTTGTGGGAAGAGAGTTTATGAAGGGATTGCTTGTGATGCTCCGGTTTCAGTATGT
GGAGCAACATGTGGTAAAATGTTGAGTTGTGGATTTCATAGGTGCCCTGAAAGGTGCCAC
AAAGGCCCCTGCATTGAAACTTGTAGGGTGGTCGTTACTAAATCGTGTAGGTGTGGGAGT
TATAGGAAACAGGTTCCTTGCTATCAAGATTTGACATGTGAAAGGAAGTGTCAGAAAATG
CGGGACTGTGGAAGACATGCCTGTAAGCGCAAATGCTGTGATGGGGATTGCCCACCTTGT
TCTGAGATGTGTGACAGGAAGCTCCGTTGTAGGAATCACAAGTGTCCAGCTCCATGCCAC
AGAGGCGCTTGTGCACCCTGCCCAGTGATGGTCACAATTTCATGTTTGTGCGGGGAGACA
CATTTCGAGGTTCCTTGTGGTGCAGAAGCTGAACAAAAACCTCCAAAATGTCGTAAACCA
TGTTGTGTAGATCGTTTATGCAGGCATGCTTCTAATTGCAAGCCACATAGGTGTCACTAT
GGAGCTTGCCCACCATGTCGTTTACTTTGTGATGAAGAATATCCTTGTGGGCACAAGTGT
GAATTGAGGTGCCATGGCCCTACACAACCTCCTCTTCCAGAGTTCACTTTGAAACCAAAG
AAAAGGAGACCGAACAATCAGACGGAACCTACTCCTGGTTCATCATGCCCCCCATGCCCA
CAACTTGTTTGGAGGTCTTGTTTGGGTAATCATGTAGGAGCAGAAAGAATGATGGTCTGC
TCAGACAGGACAGTATTTTCCTGTGACAATTTGTGTGGAAATCCTCTTCCTTGTGGAAAT
CACTACTGCACTAAAGTTTGCCATGCCTTGGTTAGTAGTACAAAATTATATGGTAGTAGA
AGACCCGAATCTTGTGAAGAGTGTACTCTTCCTTGCCAACAGGAAAGAAAACCTACTTGT
CCTCATCCATGTCCCTTGCGTTGTCATCCTGGAGAATGCCCCCCTTGCAAAGCACTGATA
AAGCGTTCATGTCACTGTGGTTCCATGGTTCATGTCTTTGAGTGCATATACTACAACAGC
TTGTCCGCTAAAGAGCAACTTACTGTTCGATCATGTGGAGGACCATGTCATAGAAAATTA
CCTAATTGTACGCACCTTTGCCCAGAGACATGTCATCCTGGTGAATGTCCATCTCCTGAT
CAATGCTCCAAGAAGGTTACTGCTCGCTGTGGATGCCAAACTTTGAAAAAAGAGTTGGTC
TGCAAGGATGTGCAAGCAGCCTATAGAAGTAATGGTACTGATCCCAAAGATGTATCTAGA

Peptide Sequence

PEP ID

XP_016456072.1
PEP Infomation

PREDICTED: NF-X1-type zinc finger protein NFXL2-like, partial [Nicotiana tabacum]
Sequence

MTSWSATVAPPLSPPSSDSDSDSDSATTSDSHHHRHSDLSSTIFKSYLEHSSGDHNNQQQ
QQHDLIKIQSFLTSSRSGALSCLICLERIRPSDPTWSCSSGCFAVFYLHCIQSWAVQCSN
LAAARAVTRAATPNDSSLLWHCPKCRVEYSKSQIPKNYYCFCGKLPDPPHDPWVLPHSCN
EICGRPLKYNCGHHCLLLCHPGPCPSCPKLVKSRCFCGAVEDVKRCGFKNFSCNGVCKKL
LDCKTHMCTETCHEGDCPPCKAKGIYKCQCGKLEMKRECFDRVFRCENPCDKLLGCGRHK
CERGCHEGECGDCPLQGKRTCPCGKRVYEGIACDAPVSVCGATCGKMLSCGFHRCPERCH
KGPCIETCRVVVTKSCRCGSYRKQVPCYQDLTCERKCQKMRDCGRHACKRKCCDGDCPPC
SEMCDRKLRCRNHKCPAPCHRGACAPCPVMVTISCLCGETHFEVPCGAEAEQKPPKCRKP
CCVDRLCRHASNCKPHRCHYGACPPCRLLCDEEYPCGHKCELRCHGPTQPPLPEFTLKPK
KRRPNNQTEPTPGSSCPPCPQLVWRSCLGNHVGAERMMVCSDRTVFSCDNLCGNPLPCGN
HYCTKVCHALVSSTKLYGSRRPESCEECTLPCQQERKPTCPHPCPLRCHPGECPPCKALI
KRSCHCGSMVHVFECIYYNSLSAKEQLTVRSCGGPCHRKLPNCTHLCPETCHPGECPSPD
QCSKKVTARCGCQTLKKELVCKDVQAAYRSNGTDPKDVSR

Transcript Sequence

Gene sequence data has not been registered.